Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs9913252 | chr17:47200661 | T/C | 3.15E-5 | 205 | 4.82 | 16.78 | 16.47 | KM Plot |
KIRP | rs9917437 | chr20:25721169 | C/T | 8.68E-9 | 214 | 16.43 | 15.88 | 0.47 | KM Plot |
KIRP | rs9920394 | chr15:32310810 | A/G | 7.61E-5 | 214 | 26.77 | 9.33 | 16.53 | KM Plot |
KIRP | rs9921781 | chr16:4541694 | C/T | 3.28E-6 | 214 | 16.47 | 12.37 | 10.83 | KM Plot |
KIRP | rs9922933 | chr16:4572602 | T/C | 3.63E-6 | 212 | 16.53 | 12.37 | 10.83 | KM Plot |
KIRP | rs9925807 | chr16:74679713 | G/C | 4.76E-5 | 209 | 13.1 | 19.83 | 14.83 | KM Plot |
KIRP | rs9926490 | chr16:47547607 | A/G | 7.93E-8 | 214 | 17.6 | 12.32 | 12.85 | KM Plot |
KIRP | rs9929068 | chr16:74350231 | G/A | 0.000532 | 209 | 14.97 | 16.97 | 13.03 | KM Plot |
KIRP | rs9935427 | chr16:47612299 | G/A | 7.92E-8 | 214 | 17.2 | 12.63 | 12.85 | KM Plot |
KIRP | rs9936361 | chr16:47596599 | A/G | 8.97E-8 | 213 | 17.2 | 12.32 | 12.85 | KM Plot |
KIRP | rs9938647 | chr16:4572151 | A/G | 3.63E-6 | 212 | 16.53 | 12.37 | 10.83 | KM Plot |
KIRP | rs9945142 | chr18:71545304 | A/G | 9.09E-5 | 214 | 9.4 | 13.3 | 16.53 | KM Plot |
KIRP | rs9952019 | chr18:10213364 | A/G | 2.02E-5 | 214 | 9 | 13.43 | 16.97 | KM Plot |
KIRP | rs9954904 | chr18:3290200 | G/A | 4.64E-8 | 211 | 14.85 | 20.2 | 10.83 | KM Plot |
KIRP | rs997921 | chr17:80781113 | G/A | 4.88E-5 | 206 | 14.85 | 17.6 | 15.15 | KM Plot |